PRICE (Probabilistic inference of codon activities by an EM algorithm) is a method to identify ORFs using Ribo-seq experiments embedded in a pipeline for data analysis
Project wiki: https://github.com/erhard-lab/gedi/wiki/Price
Software download: https://github.com/erhard-lab/gedi/releases
Globally refined analysis of newly transcribed RNA and decay rates using SLAM-seq (GRAND-SLAM) is a computational approach to infer the proportion and the corresponding posterior distribution of new and old RNA for each gene from SLAM-seq experiments.
Project wiki: https://github.com/erhard-lab/gedi/wiki/GRAND-SLAM
Software download: Please inquiry at Florian.Erhard at uni-wuerzburg.de